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Muir, A.M., T.M. Sutton, M.T. Arts, R.M. Claramunt, M.P. Ebener, J.D. Fitzsimons, T.B. Johnson, R.E. Kinnunen, M.A. Koops, and M.M. Sepulveda. 2010. Does condition of lake whitefish spawners affect physiological condition of juveniles? Journal of Great Lakes Research 36:92-99.
Stockwell, J.D., M.P. Ebener, J.A. Black, O.T. Gorman, T.R. Hrabik, R.E. Kinnunen, W.P. Mattes, J.K. Oyadomari, S.T. Schram, D.R. Schreiner, M.J. Seider, S.P. Sitar, D.L. Yule. 2009. A synthesis of cisco recovery in Lake Superior: Implications for native fish rehabilitation in the Laurentian Great Lakes. North American Journal of Fisheries Management. 29:626-652.
Ebener, M.P., R.E. Kinnunen, L.C. Mohr, P.J. Schneeberger, J.A. Hoyle, and P. Peeters. 2008. Management of commercial fisheries for lake whitefish in the Laurentian Great Lakes of North America. Pages 99–143 in M. G. Schechter, W. W. Taylor, and N. J. Leonard, editors. International governance of fisheries ecosystems: Learning from the past, finding solutions for the future. American Fisheries Society, Symposium 62, Bethesda, Maryland.
Kinnunen, R.E., M.C. Gould, and P. Cambier. 2005. Composting commercial fish processing waste from fish caught in the Michigan waters of the Great Lakes. Michigan State University Technical Bulletin. 40 pgs.
Pangle, K. L., T. M. Sutton, R. E. Kinnunen, and M. H. Hoff. 2005. Effects of body size, condition, and lipid content on the survival of juvenile lake herring during rapid cooling events. Journal of Great Lakes Research 31:360-366.
Pangle, K.L., T.M. Sutton, R.E. Kinnunen, M.H. Hoff. 2004. Overwinter survival of juvenile lake herring in relation to body size, physiological condition, energy stores, and food ration. Trans. Am. Fish Soc. Vol. 133 (5): 1235-1246.
Hinshaw, J.M., G. Fornshell, R.E. Kinnunen. 2004. A profile of the aquaculture of trout in the United States. Report for USDA Risk Management Agency, Federal Crop Insurance Corporation, through Mississippi State University. 46 pgs.
Kinnunen, R.E., editor. 2002. Environmental Strategies for Aquaculture Symposium Proceedings (December 2000). 62nd Midwest Fish and Wildlife Conference, Minneapolis, MN. NCRAC CD Series #101, NCRAC Publications Office, Iowa State University, Ames, IA.
Gunderson, J.L. and R.E. Kinnunen. 2001. Aquatic nuisance species-Hazard analysis and critical control point training curriculum. Michigan Sea Grant Publication No. MSG-00-400.
Kinnunen, R.E. 2000. A white paper on the status and needs of salmonid aquaculture in the North Central Region. North Central Regional Aquaculture Center. Michigan State University.
Kinnunen, R.E. 1996. Walleye fingerling culture in undrainable ponds. Pages 135-145 in R.C. Summerfelt, editor. Walleye culture manual. NCRAC Culture Series #101, NCRAC Publications Office, Iowa State University, Ames.